THEME: "Frontiers in Chemical Sciences for Health, Energy, and Sustainability"
Institute of Chemical Technology Mumbai INDIA
Identification of Novel Potential Anti-Diabetic Candidates targeting Human Pancreatic ?-Amylase and Human ?- Glycosidase: An Exhaustive Structure-based Screening
Deepika Maliwal aka Deepika Pissurlenkar is a Research Scholar at the Department of
Pharmaceutical Sciences and Technology at Institute of Chemical Technology, Mumbai,
Maharashtra, India. She has been a faculty with rich experience of teaching and
research in Organic and Medicinal Chemistry. Ms. Deepika is completing her research
in computational chemistry on identification of novel molecules against Lifestyle
Diseases like Diabetes and Dyslipidemia. She has expertise in molecular modeling for
drug design using structure-based and ligand-based methods along with molecular
dynamics simulations of natural and synthetic polymers to understand binding. Ms.
Deepika is graduate and postgraduate from B.R. Nahata College of Pharmacy, Madhya
Pradesh affiliated to Rajiv Gandhi Prodyogik Vishwavidyalaya, Madhya Pradesh where
is also joined later as Assistant Professor. Ms. Deepika has extensive publications in
peer-reviewed journals. She’s currently scouting for post doctoral opportunities in
computational chemistry.
c Diabetes is a major health issue that has reached alarming levels with nearly half a billion
people affected worldwide. It is a serious and long-term medical condition with a major
impact on the lives and well-being of individuals, families, and societies at large. Diabetes is
amongst the top 10 diseases responsible for the death amongst adults with an expected rise to
10.2% (578 million) by 2030 and 10.9% (700 million) by 2045. The carbohydrates get
absorbed into the body upon hydrolysis by human pancreatic ?-amylase and other intestinal
enzymes like human ?-glucosidase. The ?-amylase and ?-glucosidase are well validated
therapeutic targets in the treatment of Type II diabetes (T2DM) that play a vital role in
modulating the blood glucose level after a meal. Herein, we report novel and diverse
molecules identified as potential candidates, predicted to have affinity for ?-amylase and ?-
glucosidase. These molecules have been identified via hierarchical multistep docking of
small molecules database with the estimated binding free energies. A Glide XP Score cutoff
?8.00 kcal/mol was implemented to filter out non potential molecules from the database.
Four molecules have been identified after an exhaustive computational study involving the
evaluation of binding interactions and assessment of the pharmacokinetics and toxicity
profiles. The in-depth analysis of protein–ligand interactions was performed using a 100ns
molecular dynamics (MD) simulation to establish the dynamic stability. Furthermore MMGBSA
based binding free energies were computed for 1000 trajectory snapshots to ascertain
the strong binding affinity of these molecules for ?-amylase and ?-glucosidase. The
identified molecules can be considered as promising candidates for further drug development
through necessary experimental assessments.